SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227100225
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr3:14195791-14269351
Size: 73560
Super-enhancer rank 225
Number of SE elements: 14
ChIP density(Case|Control): 56641.2|6193.752
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LSM3 ;
ROSE Overlap LSM3 ;
ROSE Proximal XPC ;
ROSE Closest LSM3 ;
Lasso ;
PreSTIGE ;
ABC XPC ; LSM3 ; LINC01267 ; SLC6A6 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100225 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers