SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227100221
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr1:2086025-2150471
Size: 64446
Super-enhancer rank 221
Number of SE elements: 18
ChIP density(Case|Control): 55185.1098|4420.9956
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRKCZ ;
ROSE Overlap PRKCZ ;
ROSE Proximal FAAP20 ;
ROSE Closest PRKCZ ;
Lasso ;
PreSTIGE ;
ABC FAM41C ; SLC35E2B ; CDK11B ; CDK11A ; TMEM52 ; CFAP74 ; LOC105378591 ; PRKCZ ; FAAP20 ; SKI ; MORN1 ; RER1 ; PEX10 ; PLCH2 ; PANK4 ; TNFRSF14 ; TP73-AS1 ; TPRG1L ; FAM213B ; LOC115110 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100221 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers