SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227100088
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr9:71628591-71783144
Size: 154553
Super-enhancer rank 88
Number of SE elements: 63
ChIP density(Case|Control): 86163.2975|13523.3875
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM2 ;
ROSE Overlap TMEM2 ;
ROSE Proximal TMEM2 ;
ROSE Closest TMEM2 ;
Lasso ;
PreSTIGE ;
ABC FXN ; TJP2 ; APBA1 ; FAM122A ; PIP5K1B ; PTAR1 ; C9orf135-AS1 ; C9orf135 ; SMC5-AS1 ; SMC5 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100088 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers