SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227100086
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr11:9507381-9654702
Size: 147321
Super-enhancer rank 86
Number of SE elements: 29
ChIP density(Case|Control): 86271.1776|12507.5529
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WEE1 ;
ROSE Overlap ZNF143 ; WEE1 ;
ROSE Proximal ZNF143 ; SWAP70 ; LOC644656 ;
ROSE Closest WEE1 ;
Lasso ;
PreSTIGE ;
ABC WEE1 ; ST5 ; AKIP1 ; C11orf16 ; SBF2-AS1 ; SWAP70 ; ZNF143 ; LOC644656 ; IPO7 ; TMEM9B-AS1 ; TMEM41B ; DENND5A ; TMEM9B ; LOC101928008 ; LOC440028 ; LOC102724784 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100086 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers