SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_227100029
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr9:127494070-127586616
Size: 92546
Super-enhancer rank 29
Number of SE elements: 23
ChIP density(Case|Control): 106113.2436|7070.5144
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FAM129B ;
ROSE Overlap FAM129B ; LRSAM1 ;
ROSE Proximal RPL12 ; LRSAM1 ; STXBP1 ; SNORA65 ;
ROSE Closest FAM129B ;
Lasso ;
PreSTIGE ;
ABC NR6A1 ; ARPC5L ; RPL35 ; WDR38 ; GOLGA1 ; SCAI ; PPP6C ; LOC105376271 ; RABEPK ; GAPVD1 ; PSMB7 ; LHX2 ; MIR181A2HG ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100029 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers