SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_227100013
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr22:39170672-39312191
Size: 141519
Super-enhancer rank 13
Number of SE elements: 39
ChIP density(Case|Control): 132263.6574|10076.1528
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PDGFB ;
ROSE Overlap PDGFB ;
ROSE Proximal RNU86 ; RPL3 ; CBX7 ; SNORD83B ; SNORD43 ; SNORD83A ; SYNGR1 ;
ROSE Closest PDGFB ;
Lasso ;
PreSTIGE ;
ABC DNAL4 ; CBX6 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100013 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers