SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_224000208
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: RPMI8226 Control
Genomic region: chr1:12798645-12844972
Size: 46327
Super-enhancer rank 208
Number of SE elements: 24
ChIP density(Case|Control): 46461.3483|12619.4748
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRAMEF11 ;
ROSE Overlap PRAMEF11 ;
ROSE Proximal PRAMEF1 ; HNRNPCL1 ; PRAMEF4 ; PRAMEF2 ; PRAMEF12 ;
ROSE Closest PRAMEF11 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_224000208 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers