SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_223600533
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: prostate
Biosample name: 22Rv1 dexamethasone
Genomic region: chr19:49861354-49870363
Size: 9009
Super-enhancer rank 533
Number of SE elements: 3
ChIP density(Case|Control): 9967.5576|1024.3233
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PNKP ;
ROSE Overlap AKT1S1 ; PNKP ;
ROSE Proximal TBC1D17 ; MIR6800 ; PTOV1 ; FUZ ; MED25 ; PTOV1-AS2 ; IL4I1 ; MIR4749 ; PTOV1-AS1 ; MIR4750 ;
ROSE Closest PNKP ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_223600533 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers