SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_223600279
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: prostate
Biosample name: 22Rv1 dexamethasone
Genomic region: chr12:57235461-57243534
Size: 8073
Super-enhancer rank 279
Number of SE elements: 5
ChIP density(Case|Control): 14859.9711|1145.5587
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NDUFA4L2 ;
ROSE Overlap NDUFA4L2 ; STAC3 ;
ROSE Proximal SHMT2 ; MIR1228 ; STAC3 ; NXPH4 ;
ROSE Closest NDUFA4L2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_223600279 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers