SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_223100362
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: HCI-001
Genomic region: chr1:225874741-225892070
Size: 17329
Super-enhancer rank 362
Number of SE elements: 3
ChIP density(Case|Control): 13667.3823|2611.4803
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM63A ;
ROSE Overlap TMEM63A ; LEFTY1 ;
ROSE Proximal EPHX1 ; LEFTY2 ; PYCR2 ; MIR6741 ;
ROSE Closest TMEM63A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_223100362 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers