SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_223100223
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: HCI-001
Genomic region: chr7:99942670-99957063
Size: 14393
Super-enhancer rank 223
Number of SE elements: 7
ChIP density(Case|Control): 16238.1826|2027.9737
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GJC3 ;
ROSE Overlap ;
ROSE Proximal TRIM4 ; GJC3 ; AZGP1P1 ; AZGP1 ;
ROSE Closest GJC3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_223100223 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers