SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_223100012
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: HCI-001
Genomic region: chr3:184561763-184605650
Size: 43887
Super-enhancer rank 12
Number of SE elements: 6
ChIP density(Case|Control): 54819.2517|5560.4829
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EPHB3 ;
ROSE Overlap EPHB3 ;
ROSE Proximal EIF2B5-AS1 ;
ROSE Closest EPHB3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_223100012 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers