SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_222900007
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: BCM-2665
Genomic region: chr1:156081823-156131053
Size: 49230
Super-enhancer rank 7
Number of SE elements: 13
ChIP density(Case|Control): 77202.486|10707.525
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LMNA ;
ROSE Overlap LMNA ; MEX3A ;
ROSE Proximal LAMTOR2 ; RAB25 ; UBQLN4 ; SEMA4A ; LMNA ;
ROSE Closest LMNA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_222900007 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers