SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_222600194
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: BCM-3107
Genomic region: chr19:35122812-35125452
Size: 2640
Super-enhancer rank 194
Number of SE elements: 1
ChIP density(Case|Control): 12690.48|1210.968
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR6887 ;
ROSE Overlap LGI4 ; FXYD3 ;
ROSE Proximal FXYD1 ; FXYD5 ; FXYD3 ; FXYD7 ; MIR6887 ; HPN-AS1 ;
ROSE Closest MIR6887 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_222600194 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers