SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_221900589
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: SUM1315
Genomic region: chr6:25991105-25994204
Size: 3099
Super-enhancer rank 589
Number of SE elements: 3
ChIP density(Case|Control): 22744.1808|1080.0015
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST1H1A ;
ROSE Overlap ;
ROSE Proximal TRIM38 ; HIST1H2AB ; HIST1H4B ; HIST1H3A ; HIST1H1A ; HIST1H2BB ; HIST1H3B ; HIST1H4A ;
ROSE Closest HIST1H1A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_221900589 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers