SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_221900549
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: SUM1315
Genomic region: chr16:1769082-1774639
Size: 5557
Super-enhancer rank 549
Number of SE elements: 1
ChIP density(Case|Control): 23183.804|545.6974
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NME3 ;
ROSE Overlap MAPK8IP3 ; EME2 ; NME3 ; MRPS34 ;
ROSE Proximal MRPS34 ; SPSB3 ; IGFALS ; MIR3177 ; NUBP2 ;
ROSE Closest NME3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_221900549 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers