SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_221900544
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: SUM1315
Genomic region: chr17:28715907-28723112
Size: 7205
Super-enhancer rank 544
Number of SE elements: 1
ChIP density(Case|Control): 23473.89|621.071
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPL23A ;
ROSE Overlap RAB34 ; SNORD42B ; RPL23A ; SNORD4A ; NARR ;
ROSE Proximal SNORD4B ; TLCD1 ; PROCA1 ; SNORD42A ; TRAF4 ; RAB34 ; NEK8 ;
ROSE Closest RPL23A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_221900544 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers