SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_221900519
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: SUM1315
Genomic region: chr1:28505293-28510687
Size: 5394
Super-enhancer rank 519
Number of SE elements: 1
ChIP density(Case|Control): 24489.8388|825.8214
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORA73B ;
ROSE Overlap SNORA73B ; RCC1 ; SNHG3 ; SNORA73A ;
ROSE Proximal RCC1 ; SNHG3 ; TRNAU1AP ;
ROSE Closest SNORA73B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_221900519 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers