SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_216900511
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: Hypoxia - infection with Fnn (HF)
Genomic region: chr10:97399333-97414541
Size: 15208
Super-enhancer rank 511
Number of SE elements: 3
ChIP density(Case|Control): 14105.42|1364.1576
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RRP12 ;
ROSE Overlap RRP12 ;
ROSE Proximal ZDHHC16 ; PGAM1 ; RRP12 ; EXOSC1 ;
ROSE Closest RRP12 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_216900511 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers