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Super-enhancer overview

SE ID: SE_02_216900087
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: Hypoxia - infection with Fnn (HF)
Genomic region: chr12:65917884-65958500
Size: 40616
Super-enhancer rank 87
Number of SE elements: 15
ChIP density(Case|Control): 44852.2488|6059.9072
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100129940 ;
ROSE Overlap HMGA2 ;
ROSE Proximal LOC100129940 ;
ROSE Closest LOC100129940 ;
Lasso ;
PreSTIGE ;
ABC LOC105369187 ; LOC100507065 ; LOC100129940 ; GNS ; LEMD3 ; HELB ; MSRB3 ; XPOT ; C12orf66 ; TMEM5 ; HMGA2 ; RPSAP52 ; LLPH ; LLPH-AS1 ; TMBIM4 ; TBK1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_216900087 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers