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Super-enhancer overview

SE ID: SE_02_216900083
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: Hypoxia - infection with Fnn (HF)
Genomic region: chr1:16134766-16189640
Size: 54874
Super-enhancer rank 83
Number of SE elements: 18
ChIP density(Case|Control): 45583.8318|4878.2986
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EPHA2 ;
ROSE Overlap EPHA2 ;
ROSE Proximal RSG1 ; ARHGEF19 ;
ROSE Closest EPHA2 ;
Lasso ;
PreSTIGE ;
ABC RCC2 ; PADI1 ; PADI2 ; TMEM82 ; SLC25A34 ; PLEKHM2 ; DDI2 ; DNAJC16 ; CASP9 ; EFHD2 ; FHAD1 ; C1orf195 ; TMEM51 ; TMEM51-AS1 ; SDHB ; ATP13A2 ; MFAP2 ; CROCC ; MST1P2 ; CROCCP2 ; NBPF1 ; NECAP2 ; SZRD1 ; FBXO42 ; RSG1 ; ARHGEF19 ; FAM131C ; HSPB7 ; ZBTB17 ; FLJ37453 ; SPEN ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_216900083 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers