SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_216900044
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: Hypoxia - infection with Fnn (HF)
Genomic region: chr12:124904557-124941175
Size: 36618
Super-enhancer rank 44
Number of SE elements: 10
ChIP density(Case|Control): 70760.6232|2522.9802
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR5188 ;
ROSE Overlap MIR5188 ; UBC ;
ROSE Proximal SCARB1 ; DHX37 ;
ROSE Closest MIR5188 ;
Lasso ;
PreSTIGE ;
ABC NCOR2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_216900044 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers