SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_216900009
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: Hypoxia - infection with Fnn (HF)
Genomic region: chr1:8005007-8100125
Size: 95118
Super-enhancer rank 9
Number of SE elements: 23
ChIP density(Case|Control): 125156.2644|8874.5094
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ERRFI1 ;
ROSE Overlap ERRFI1 ;
ROSE Proximal PARK7 ;
ROSE Closest ERRFI1 ;
Lasso ;
PreSTIGE ;
ABC PARK7 ; ERRFI1 ; SLC45A1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_216900009 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers