SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_216100935
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27 EVT
Genomic region: chr19:1249879-1273039
Size: 23160
Super-enhancer rank 935
Number of SE elements: 10
ChIP density(Case|Control): 22166.436|1475.292
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CIRBP ;
ROSE Overlap CIRBP-AS1 ; CIRBP ; MIDN ;
ROSE Proximal C19orf24 ; ATP5D ; STK11 ; CBARP ; EFNA2 ;
ROSE Closest CIRBP ;
Lasso ;
PreSTIGE ;
ABC ATP5D ; MIDN ; CIRBP ; CIRBP-AS1 ; C19orf24 ; MUM1 ; STK11 ; SBNO2 ; GPX4 ; ARHGAP45 ; FSTL3 ; WDR18 ; TMEM259 ; CNN2 ; ABCA7 ; PCSK4 ; RPS15 ; DAZAP1 ; REEP6 ; NDUFS7 ; GAMT ; CBARP ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_216100935 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers