SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_216100616
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27 EVT
Genomic region: chr3:10788159-10812588
Size: 24429
Super-enhancer rank 616
Number of SE elements: 9
ChIP density(Case|Control): 28738.2756|1573.2276
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC6A11 ;
ROSE Overlap ;
ROSE Proximal LINC00606 ; SLC6A11 ;
ROSE Closest SLC6A11 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_216100616 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers