SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_216100459
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27 EVT
Genomic region: chr12:122887079-122926034
Size: 38955
Super-enhancer rank 459
Number of SE elements: 12
ChIP density(Case|Control): 35297.1255|3186.519
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VPS37B ;
ROSE Overlap ABCB9 ; VPS37B ;
ROSE Proximal OGFOD2 ;
ROSE Closest VPS37B ;
Lasso ;
PreSTIGE ;
ABC CLIP1 ; CLIP1-AS1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_216100459 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers