SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_216100322
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27 EVT
Genomic region: chr1:201503126-201522565
Size: 19439
Super-enhancer rank 322
Number of SE elements: 8
ChIP density(Case|Control): 40396.1859|2562.0602
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CSRP1 ;
ROSE Overlap CSRP1 ; RPS10P7 ;
ROSE Proximal CSRP1 ; PHLDA3 ;
ROSE Closest CSRP1 ;
Lasso ;
PreSTIGE ;
ABC TNNT2 ; LAD1 ; PHLDA3 ; CSRP1 ; RPS10P7 ; NAV1 ; IPO9 ; IPO9-AS1 ; SHISA4 ; ZNF281 ; KIF14 ; CAMSAP2 ; KIF21B ; TMEM9 ; PKP1 ; SYT2 ; UBE2T ; ARL8A ; RNPEP ; LMOD1 ; TIMM17A ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_216100322 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers