SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_216100274
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27 EVT
Genomic region: chr1:161072156-161096787
Size: 24631
Super-enhancer rank 274
Number of SE elements: 14
ChIP density(Case|Control): 41754.4712|1302.9799
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PVRL4 ;
ROSE Overlap PVRL4 ;
ROSE Proximal DEDD ; KLHDC9 ; ARHGAP30 ; USF1 ; NIT1 ; TSTD1 ; PFDN2 ;
ROSE Closest PVRL4 ;
Lasso ;
PreSTIGE ;
ABC NIT1 ; PFDN2 ; KLHDC9 ; DEDD ; UFC1 ; USP21 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_216100274 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers