SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_216100024
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27 EVT
Genomic region: chr3:112358566-112420848
Size: 62282
Super-enhancer rank 24
Number of SE elements: 23
ChIP density(Case|Control): 104926.4854|6589.4356
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CD200 ;
ROSE Overlap CD200 ;
ROSE Proximal ;
ROSE Closest CD200 ;
Lasso ;
PreSTIGE ;
ABC CCDC80 ; GTPBP8 ; CD200R1 ; LINC02042 ; NEPRO ; SLC35A5 ; ATG3 ; SLC9C1 ; C3orf52 ; ABHD10 ; PLCXD2 ; ZBED2 ; PVRL3-AS1 ; ZBTB20-AS1 ; QTRT2 ; CCDC191 ; ZDHHC23 ; GRAMD1C ; ATP6V1A ; NAA50 ; USF3 ; SPICE1 ; CFAP44 ; BOC ; LINC02044 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_216100024 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers