SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_216100019
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27 EVT
Genomic region: chr4:7935166-7984463
Size: 49297
Super-enhancer rank 19
Number of SE elements: 26
ChIP density(Case|Control): 106900.5445|3687.4156
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AFAP1 ;
ROSE Overlap LOC389199 ; ABLIM2 ; AFAP1 ;
ROSE Proximal MIR95 ; AFAP1 ;
ROSE Closest AFAP1 ;
Lasso ;
PreSTIGE ;
ABC LOC389199 ; AFAP1 ; HTRA3 ; AFAP1-AS1 ; ABLIM2 ; SH3TC1 ; PSAPL1 ; FLJ36777 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_216100019 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers