SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_213100258
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116
Genomic region: chr11:10511607-10541155
Size: 29548
Super-enhancer rank 258
Number of SE elements: 18
ChIP density(Case|Control): 42744.1368|3265.054
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF141 ;
ROSE Overlap RNF141 ;
ROSE Proximal MTRNR2L8 ; MIR4485 ; LYVE1 ; MRVI1-AS1 ;
ROSE Closest RNF141 ;
Lasso ;
PreSTIGE ;
ABC AMPD3 ; LYVE1 ; MRVI1-AS1 ; RNF141 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_213100258 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers