SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_213100190
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116
Genomic region: chr5:36637495-36667108
Size: 29613
Super-enhancer rank 190
Number of SE elements: 19
ChIP density(Case|Control): 55565.8332|3669.0507
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC1A3 ;
ROSE Overlap SLC1A3 ;
ROSE Proximal SLC1A3 ;
ROSE Closest SLC1A3 ;
Lasso ;
PreSTIGE ;
ABC SLC1A3 ; NADK2 ; SKP2 ; LMBRD2 ; LOC100506406 ; CAPSL ; SPEF2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_213100190 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers