SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_201700649
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Nasopharyngeal carcinoma
Biosample name: Nasopharyngeal carcinoma
Genomic region: chr20:64038561-64068018
Size: 29457
Super-enhancer rank 649
Number of SE elements: 4
ChIP density(Case|Control): 48100.3353|8380.5165
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SOX18 ;
ROSE Overlap TCEA2 ; LINC00176 ; SOX18 ;
ROSE Proximal MIR6813 ; RGS19 ; OPRL1 ; LKAAEAR1 ; NPBWR2 ;
ROSE Closest SOX18 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_201700649 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers