SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_201700424
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Nasopharyngeal carcinoma
Biosample name: Nasopharyngeal carcinoma
Genomic region: chr1:20575521-20615191
Size: 39670
Super-enhancer rank 424
Number of SE elements: 5
ChIP density(Case|Control): 57822.992|8291.03
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDA ;
ROSE Overlap CDA ;
ROSE Proximal PINK1-AS ; PINK1 ; FAM43B ; DDOST ; MIR6084 ;
ROSE Closest CDA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_201700424 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers