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Super-enhancer overview

SE ID: SE_02_201700413
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Nasopharyngeal carcinoma
Biosample name: Nasopharyngeal carcinoma
Genomic region: chr6_GL000255v2_alt:3048835-3092944
Size: 44109
Super-enhancer rank 413
Number of SE elements: 9
ChIP density(Case|Control): 56014.0191|5897.3733
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ;
ROSE Overlap SNORD52 ; HSPA1L ; LSM2 ; C6orf48 ; HSPA1A ; HSPA1B ; SNORD48 ; VARS ;
ROSE Proximal ;
ROSE Closest VARS ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_201700413 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers