SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_200801230
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr9:129694201-129713061
Size: 18860
Super-enhancer rank 1230
Number of SE elements: 6
ChIP density(Case|Control): 12328.782|2223.594
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRRX2-AS1 ;
ROSE Overlap PRRX2 ; PRRX2-AS1 ;
ROSE Proximal PTGES ;
ROSE Closest PRRX2-AS1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200801230 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers