SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_200801145
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr6:3053493-3069589
Size: 16096
Super-enhancer rank 1145
Number of SE elements: 3
ChIP density(Case|Control): 12207.2064|1567.7504
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RIPK1 ;
ROSE Overlap ;
ROSE Proximal BPHL ; HTATSF1P2 ; RIPK1 ;
ROSE Closest RIPK1 ;
Lasso ;
PreSTIGE ;
ABC LINC01600 ; SERPINB6 ; LINC01011 ; NQO2 ; SERPINB1 ; HTATSF1P2 ; LOC101927759 ; BPHL ; PSMG4 ; GMDS ; GMDS-AS1 ; WRNIP1 ; SERPINB9P1 ; TUBB2A ; LOC100507194 ; TUBB2B ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200801145 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers