SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_200801141
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr9:6680357-6685360
Size: 5003
Super-enhancer rank 1141
Number of SE elements: 2
ChIP density(Case|Control): 10950.5664|294.1764
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GLDC ;
ROSE Overlap ;
ROSE Proximal GLDC ; KDM4C ;
ROSE Closest GLDC ;
Lasso ;
PreSTIGE ;
ABC PLGRKT ; CD274 ; PDCD1LG2 ; RIC1 ; ERMP1 ; KIAA2026 ; RANBP6 ; IL33 ; UHRF2 ; KDM4C ; TMEM261 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200801141 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers