SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_200801009
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr20:296779-310537
Size: 13758
Super-enhancer rank 1009
Number of SE elements: 3
ChIP density(Case|Control): 12686.2518|1220.3346
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZCCHC3 ;
ROSE Overlap ZCCHC3 ;
ROSE Proximal SOX12 ; NRSN2-AS1 ; NRSN2 ; DEFB132 ; C20orf96 ;
ROSE Closest ZCCHC3 ;
Lasso ;
PreSTIGE ;
ABC C20orf96 ; ZCCHC3 ; NRSN2-AS1 ; SOX12 ; NRSN2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200801009 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers