SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_200800809
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr4:2534667-2537925
Size: 3258
Super-enhancer rank 809
Number of SE elements: 1
ChIP density(Case|Control): 13229.7606|336.2256
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF4 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest RNF4 ;
Lasso ;
PreSTIGE ;
ABC SH3BP2 ; TNIP2 ; FGFRL1 ; RNF4 ; CFAP99 ; ZFYVE28 ; NOP14-AS1 ; NOP14 ; MFSD10 ; ADD1 ; GRK4 ; HTT-AS ; HTT ; MXD4 ; HAUS3 ; POLN ; C4orf48 ; NELFA ; LETM1 ; FGFR3 ; MSANTD1 ; LRPAP1 ; ADRA2C ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200800809 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers