SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_200800724
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr9:4652602-4660558
Size: 7956
Super-enhancer rank 724
Number of SE elements: 1
ChIP density(Case|Control): 14266.6992|509.9796
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPAPDC2 ;
ROSE Overlap SPATA6L ;
ROSE Proximal CDC37L1 ; CDC37L1-AS1 ; PPAPDC2 ;
ROSE Closest PPAPDC2 ;
Lasso ;
PreSTIGE ;
ABC PUM3 ; CD274 ; PLGRKT ; JAK2 ; UHRF2 ; PDCD1LG2 ; RCL1 ; AK3 ; CDC37L1 ; RIC1 ; IL33 ; RFX3 ; SLC1A1 ; RANBP6 ; PLPP6 ; SPATA6L ; CDC37L1-AS1 ; KIAA2026 ; ERMP1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200800724 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers