SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_200800717
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr16:23898839-23924404
Size: 25565
Super-enhancer rank 717
Number of SE elements: 7
ChIP density(Case|Control): 15778.718|1981.2875
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRKCB ;
ROSE Overlap PRKCB ;
ROSE Proximal ;
ROSE Closest PRKCB ;
Lasso ;
PreSTIGE ;
ABC SMG1P1 ; USP31 ; SCNN1G ; COG7 ; NDUFAB1 ; PALB2 ; DCTN5 ; PLK1 ; CHP2 ; PRKCB ; CACNG3 ; LINC02175 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200800717 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers