SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_200800589
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr3:190301265-190346753
Size: 45488
Super-enhancer rank 589
Number of SE elements: 9
ChIP density(Case|Control): 20410.4656|4926.3504
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLDN1 ;
ROSE Overlap CLDN1 ;
ROSE Proximal CLDN16 ;
ROSE Closest CLDN1 ;
Lasso ;
PreSTIGE ;
ABC TMEM207 ; GMNC ; IL1RAP ; CLDN16 ; P3H2 ; P3H2-AS1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200800589 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers