SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_200800376
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr1:28949809-28994363
Size: 44554
Super-enhancer rank 376
Number of SE elements: 9
ChIP density(Case|Control): 24473.5122|5319.7476
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EPB41 ;
ROSE Overlap EPB41 ;
ROSE Proximal ;
ROSE Closest EPB41 ;
Lasso ;
PreSTIGE ;
ABC TAF12 ; TRNAU1AP ; RCC1 ; EYA3 ; WASF2 ; IFI6 ; FAM76A ; SNHG3 ; PHACTR4 ; MED18 ; STX12 ; PPP1R8 ; XKR8 ; THEMIS2 ; RPA2 ; SMPDL3B ; GMEB1 ; YTHDF2 ; EPB41 ; TMEM200B ; SRSF4 ; MECR ; PTPRU ; RAB42 ; SESN2 ; ATPIF1 ; DNAJC8 ; SNHG12 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200800376 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers