SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_200800370
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr17:28716030-28723278
Size: 7248
Super-enhancer rank 370
Number of SE elements: 1
ChIP density(Case|Control): 20203.8|908.8992
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPL23A ;
ROSE Overlap RAB34 ; SNORD42B ; RPL23A ; SNORD4A ; NARR ;
ROSE Proximal SNORD4B ; TLCD1 ; PROCA1 ; SNORD42A ; TRAF4 ; RAB34 ; NEK8 ;
ROSE Closest RPL23A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200800370 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers