SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_200800315
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr4:1869998-1873549
Size: 3551
Super-enhancer rank 315
Number of SE elements: 1
ChIP density(Case|Control): 20905.8023|221.5824
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WHSC1 ;
ROSE Overlap WHSC1 ;
ROSE Proximal WHSC1 ; LETM1 ;
ROSE Closest WHSC1 ;
Lasso ;
PreSTIGE ;
ABC FGFRL1 ; UVSSA ; FAM53A ; SLBP ; TMEM129 ; TACC3 ; FGFR3 ; LETM1 ; NELFA ; C4orf48 ; POLN ; HAUS3 ; MXD4 ; ZFYVE28 ; CFAP99 ; TNIP2 ; ZNF876P ; MFSD7 ; IDUA ; DGKQ ; GAK ; TMEM175 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200800315 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers