SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_200800307
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr9:15840143-15889372
Size: 49229
Super-enhancer rank 307
Number of SE elements: 15
ChIP density(Case|Control): 23152.3987|2230.0737
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CCDC171 ;
ROSE Overlap CCDC171 ;
ROSE Proximal ;
ROSE Closest RNU6-14P ;
Lasso ;
PreSTIGE ;
ABC FREM1 ; ZDHHC21 ; LOC389705 ; TTC39B ; SNAPC3 ; PSIP1 ; CCDC171 ; CNTLN ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200800307 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers