SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_200800242
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr1:17192021-17240108
Size: 48087
Super-enhancer rank 242
Number of SE elements: 14
ChIP density(Case|Control): 29102.2524|6025.3011
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PADI1 ;
ROSE Overlap PADI1 ;
ROSE Proximal MIR3972 ; PADI3 ;
ROSE Closest PADI1 ;
Lasso ;
PreSTIGE ;
ABC RCC2 ; PADI2 ; SDHB ; ATP13A2 ; MFAP2 ; CROCC ; LOC105376805 ; MST1P2 ; CROCCP2 ; NBPF1 ; NECAP2 ; SZRD1 ; FBXO42 ; PLEKHM2 ; ARHGEF10L ; TMEM51-AS1 ; EFHD2 ; FHAD1 ; TMEM51 ; CASP9 ; DNAJC16 ; AGMAT ; DDI2 ; SLC25A34 ; FBLIM1 ; ZBTB17 ; FAM131C ; RSG1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200800242 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers