SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_200800198
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr18:10453733-10483846
Size: 30113
Super-enhancer rank 198
Number of SE elements: 9
ChIP density(Case|Control): 28017.1352|3378.6786
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: APCDD1 ;
ROSE Overlap APCDD1 ;
ROSE Proximal LINC01254 ; NAPG ;
ROSE Closest APCDD1 ;
Lasso ;
PreSTIGE ;
ABC APCDD1 ; NAPG ; VAPA ; RAB31 ; PPP4R1-AS1 ; PPP4R1 ; RALBP1 ; TWSG1 ; ANKRD12 ; TUBB6 ; NDUFV2-AS1 ; NDUFV2 ; IMPA2 ; GACAT2 ; RAB12 ; MPPE1 ; CHMP1B ; PRELID3A ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200800198 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers