SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_200800101
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr8:127844931-127938245
Size: 93314
Super-enhancer rank 101
Number of SE elements: 22
ChIP density(Case|Control): 46218.4242|15574.1066
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PVT1 ;
ROSE Overlap PVT1 ;
ROSE Proximal MIR1205 ; MIR1204 ; TMEM75 ;
ROSE Closest PVT1 ;
Lasso ;
PreSTIGE ;
ABC LINC00964 ; ZNF572 ; FAM84B ; CASC19 ; CCAT1 ; CASC21 ; CCAT2 ; CASC8 ; CASC11 ; MYC ; PVT1 ; TMEM75 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200800101 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers